Package: ringbp 1.0.0
Joshua W. Lambert
ringbp: Simulate and Evaluate Targeted Interventions in Infectious Disease Outbreaks
Branching process simulation model of infectious disease transmission with flexible parameterisation of epidemiology and targeted interventions, including isolation, contact tracing and quarantine, to reduce transmission, together with functions to evaluate outbreak control. Introduced in Hellewell et al. (2020) <doi:10.1016/S2214-109X(20)30074-7>.
Authors:
ringbp_1.0.0.tar.gz
ringbp_1.0.0.zip(r-4.7)ringbp_1.0.0.zip(r-4.6)ringbp_1.0.0.zip(r-4.5)
ringbp_1.0.0.tgz(r-4.6-any)ringbp_1.0.0.tgz(r-4.5-any)
ringbp_1.0.0.tar.gz(r-4.7-any)ringbp_1.0.0.tar.gz(r-4.6-any)
ringbp_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
ringbp/json (API)
NEWS
| # Install 'ringbp' in R: |
| install.packages('ringbp', repos = c('https://epiforecasts.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/epiforecasts/ringbp/issues
Pkgdown/docs site:https://epiforecasts.io
controlling-outbreakstransmission
Last updated from:24522892f7 (on v1.0.0). Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 133 | ||
| source / vignettes | OK | 306 | ||
| linux-release-x86_64 | OK | 145 | ||
| macos-release-arm64 | OK | 109 | ||
| macos-oldrel-arm64 | OK | 130 | ||
| windows-devel | OK | 86 | ||
| windows-release | OK | 85 | ||
| windows-oldrel | OK | 91 | ||
| wasm-release | OK | 153 |
Exports:delay_optsdetect_extinctevent_prob_optsextinct_probincubation_to_generation_timeintervention_optsoffspring_optsoutbreak_modeloutbreak_setupoutbreak_stepscenario_simsim_opts
Dependencies:backportscheckmatedata.tablelatticeMASSMatrixMatrixModelsmnormtnumDerivquantregsnSparseMsurvival
{ringbp} Model Description
Rendered fromringbp-model.Rmdusingknitr::rmarkdownon Jun 15 2026.Last update: 2026-06-15
Started: 2026-02-16
Getting started with {ringbp}
Rendered fromringbp.Rmdusingknitr::rmarkdownon Jun 15 2026.Last update: 2026-06-15
Started: 2026-02-16
Scenario parameter sweep
Rendered fromparameter-sweep.Rmdusingknitr::rmarkdownon Jun 15 2026.Last update: 2026-05-20
Started: 2025-06-18
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Create a list of delay distributions to run the 'ringbp' model | delay_opts |
| Create a list of event probabilities to run the 'ringbp' model | event_prob_opts |
| Outbreak extinction functions | detect_extinct extinction extinct_prob |
| Convert symptom onset times to generation times | incubation_to_generation_time |
| Create a list of intervention settings to run the 'ringbp' model | intervention_opts |
| Create a list of offspring distributions to run the 'ringbp' model | offspring_opts |
| Run a single instance of the branching process model | outbreak_model |
| Set up initial cases for branching process | outbreak_setup |
| Move forward one generation in the branching process | outbreak_step |
| Run a specified number of simulations with identical parameters | scenario_sim |
| Create a list of simulation control options for the 'ringbp' model | sim_opts |
