{ "_id": "6a196f96acfb0bcc41dec93f", "Package": "epimixr", "Title": "Epidemiological analysis using social mixing matrices", "Version": "0.1.0", "Authors@R": "person(\"Sebastian\", \"Funk\", email = \"sebastian.funk@lshtm.ac.uk\", role = c(\"aut\", \"cre\"))", "Description": "Provides methods to conduct epidemiological analysis using\nsocial mixing matrices, such as calculating contact-adjusted\nimmunity levels or age distributions of epidemics.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "RoxygenNote": "7.2.3", "Config/pak/sysreqs": "libicu-dev libxml2-dev libssl-dev", "Repository": "https://epiforecasts.r-universe.dev", "Date/Publication": "2024-11-01 13:49:39 UTC", "RemoteUrl": "https://github.com/sbfnk/epimixr", "RemoteRef": "v0.1.0", "RemoteSha": "fe94795814c6f60e9803b71d77c4ec7de4b3b0d4", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-29 09:04:58 UTC", "User": "root" }, "Author": "Sebastian Funk [aut, cre]", "Maintainer": "Sebastian Funk ", "MD5sum": "a4f51538ae4127526fa20bfbec5fee20", "_user": "epiforecasts", "_type": "src", "_file": "epimixr_0.1.0.tar.gz", "_fileid": "3f938ce5a0a4074a3af846af95429ca7bc1d756c8815c92ed3e189dc8e66eaee", "_filesize": 88371, "_sha256": "3f938ce5a0a4074a3af846af95429ca7bc1d756c8815c92ed3e189dc8e66eaee", "_created": "2026-05-29T09:04:58.000Z", "_published": "2026-05-29T10:51:02.245Z", "_distro": "noble", "_jobs": [ { "job": 78471015807, "time": 159, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "7287130600" }, { "job": 78471015817, "time": 129, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7287121802" }, { "job": 78471015893, "time": 72, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "7288950297" }, { "job": 78471015836, "time": 91, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "7288950369" }, { "job": 78470503427, "time": 203, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7287083127" }, { "job": 78471015856, "time": 110, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7287116821" }, { "job": 78471015859, "time": 91, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "7287111413" }, { "job": 78471015822, "time": 99, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "7287113423" }, { "job": 78471015837, "time": 74, "config": "windows-release", "r": "4.6.0", "check": "NOTE", "artifact": "7287106074" } ], "_buildurl": "https://github.com/r-universe/epiforecasts/actions/runs/26628314577", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/sbfnk/epimixr", "_commit": { "id": "fe94795814c6f60e9803b71d77c4ec7de4b3b0d4", "author": "Sebastian Funk ", "committer": "Sebastian Funk ", "message": "Increment version number to 0.1.0\n", "time": 1730468979 }, "_maintainer": { "name": "Sebastian Funk", "email": "sebastian.funk@lshtm.ac.uk", "login": "sbfnk", "mastodon": "@sbfnk@fosstodon.org", "bluesky": "@sbfnk.bsky.social", "description": "Professor of Infectious Disease Dynamics at LSHTM. epiforecasts.io", "uuid": 1156307 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "socialmixr", "role": "Imports" }, { "package": "testthat", "role": "Suggests" } ], "_owner": "sbfnk", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 4, "_contributors": [ { "user": "sbfnk", "count": 35, "uuid": 1156307 } ], "_userbio": { "uuid": 54675094, "type": "organization", "name": "Epiforecasts", "description": "Researchers at the London School of Hygiene & Tropical Medicine doing research to forecast infectious diseases and perform real-time analyses." }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/epimixr" }, "_devurl": "https://github.com/sbfnk/epimixr", "_searchresults": 2, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/epimixr.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_cranurl": false, "_exports": [ "adjust_immunity", "epidemic_age_dist", "project_immunity" ], "_help": [ { "page": "adjust_immunity", "title": "Estimate reproduction number from contact information and immunity profile", "topics": [ "adjust_immunity" ] }, { "page": "epidemic_age_dist", "title": "Calculates the age distribution of an epidemic", "topics": [ "epidemic_age_dist" ] }, { "page": "project_immunity", "title": "Project immunity from a baseline", "topics": [ "project_immunity" ] } ], "_readme": "https://github.com/sbfnk/epimixr/raw/v0.1.0/README.md", "_rundeps": [ "askpass", "backports", "cachem", "checkmate", "cli", "countrycode", "cpp11", "curl", "data.table", "fastmap", "generics", "glue", "httr", "jsonlite", "lifecycle", "lubridate", "magrittr", "memoise", "mime", "oai", "openssl", "pillar", "pkgconfig", "plyr", "purrr", "R6", "Rcpp", "rlang", "socialmixr", "stringi", "stringr", "sys", "tibble", "timechange", "utf8", "vctrs", "wpp2017", "xml2" ], "_score": 2.3010299956639813, "_indexed": false, "_nocasepkg": "epimixr", "_universes": [ "epiforecasts" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-05-29T09:07:29.000Z", "distro": "noble", "commit": "fe94795814c6f60e9803b71d77c4ec7de4b3b0d4", "fileid": "9b2bdeb6be6fa7dee5d56a6587ec3a667e940bbf5b70bc47c340513cab8d4ff6", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/epiforecasts/actions/runs/26628314577" }, { "r": "4.6.0", "os": "linux", "version": "0.1.0", "date": "2026-05-29T09:07:02.000Z", "distro": "noble", "commit": "fe94795814c6f60e9803b71d77c4ec7de4b3b0d4", "fileid": "d849e67617dad3de2dc892fe49f24963ab0c2df9d02d6be32d6c6a8370938ccb", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/epiforecasts/actions/runs/26628314577" }, { "r": "4.5.3", "os": "mac", "version": "0.1.0", "date": "2026-05-29T10:50:30.000Z", "commit": "fe94795814c6f60e9803b71d77c4ec7de4b3b0d4", "fileid": "ff6196b9233dd233111dfbd55f4e4528899878842aa1bf4ba69a657427742ac1", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/epiforecasts/actions/runs/26628314577" }, { "r": "4.6.0", "os": "mac", "version": "0.1.0", "date": "2026-05-29T10:50:28.000Z", "commit": "fe94795814c6f60e9803b71d77c4ec7de4b3b0d4", "fileid": "d65a80d93da261fe50b9f61b8765ea379b4a4280639a4acfc14b0e90fbe33bf9", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/epiforecasts/actions/runs/26628314577" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-05-29T09:07:04.000Z", "commit": "fe94795814c6f60e9803b71d77c4ec7de4b3b0d4", "fileid": "1c29655c7cdd7978b13872e35ff09bd5d27f1e0db18fef70dbc035013699a486", "status": "success", "buildurl": "https://github.com/r-universe/epiforecasts/actions/runs/26628314577" }, { "r": "4.7.0", "os": "win", "version": "0.1.0", "date": "2026-05-29T09:06:21.000Z", "commit": "fe94795814c6f60e9803b71d77c4ec7de4b3b0d4", "fileid": "8602d87d67b01259c21663fd8ed30d780ec9127afb2f1ea099a2e5b62fe07440", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/epiforecasts/actions/runs/26628314577" }, { "r": "4.5.3", "os": "win", "version": "0.1.0", "date": "2026-05-29T09:06:28.000Z", "commit": "fe94795814c6f60e9803b71d77c4ec7de4b3b0d4", "fileid": "c2d2d6b6af783a0a09fe86d7ebb9f6b32886af0926be7c1e7275d9edb0915df0", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/epiforecasts/actions/runs/26628314577" }, { "r": "4.6.0", "os": "win", "version": "0.1.0", "date": "2026-05-29T09:06:02.000Z", "commit": "fe94795814c6f60e9803b71d77c4ec7de4b3b0d4", "fileid": "743b779a512e5898526e990846365abdcb4cf3ff0fadcd98a713b64705a03f5b", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/epiforecasts/actions/runs/26628314577" } ] }